Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq12155 113 2e-20 >seq12155 Length=30793 Score = 113 bits (124), Expect = 2e-20 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 25922 TCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTC 25981 || ||| ||| ||||||||||||||||||||| | || || || | || | ||||| Sbjct 29074 TCCACTCTCTTCATAAATAAATCTGGAATCCATAGCGCGTAGAAAAGGTCACGTGCTCTA 29133 Query 25982 ATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCAT 26041 ||||||||||||| ||||| || || ||| | |||| || | ||||| ||||||| Sbjct 29134 CTTTCTTCTTTTCCATGATTTTTACGTAAATCGAGCCAATCGAATACATCTGCGTGCCAT 29193 Query 26042 GGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTT 26101 || || | ||||| || ||| |||| |||||| || || ||||| |||||||| Sbjct 29194 GGCTCAATGTAGATTGCGAAAGCACCTGGTCTTTTGTTCCCGCCCTGATCAACGTATCTG 29253 Query 26102 GCAGT 26106 || || Sbjct 29254 GCGGT 29258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252996137334725