Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq10229 123 3e-23 >seq10229 Length=16019 Score = 123 bits (136), Expect = 3e-23 Identities = 130/171 (76%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 139859 CATTGCCTCTGCTGCTGCAGTTGCTTCATCTAATAGAGATGCGTTTGCTATTGGTAATCC 139918 ||| || || || || ||||||||||| ||||||| ||||| || | || ||||| || Sbjct 10376 CATGGCTTCAGCGGCAGCAGTTGCTTCGTCTAATAATGATGCATTAGAAATAGGTAAGCC 10435 Query 139919 TGTAAGTTCTGTGATGAGCGTTTGGTAATTGAATAAAGCTTCCAATCTTCCCTGAGATAT 139978 ||| || |||| | ||| ||||| |||| |||| |||||||| || ||||| || Sbjct 10436 TGTGAGCGAGCTGATCATCGTCTGGTAGTTGATCAAAGACTCCAATCTGCCTTGAGAGAT 10495 Query 139979 CTCAGCTTGATAGGGAGTGTAAGATGTGTACCAACTAGGATTCTCAAGAAC 140029 |||| ||||||||||||||| ||||||||| ||| || |||||||| Sbjct 10496 TTCAGGCTGATAGGGAGTGTAACTCGTGTACCAAGCAGGGTTTTCAAGAAC 10546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578895461321960