Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq7247 93.3 8e-14 >seq7247 Length=24577 Score = 93.3 bits (102), Expect = 8e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | ||||| |||| || | |||| |||||| ||| || ||||| Sbjct 8105 ATACCACCACGAAGACGAAGAACCAAGTGGAGAGTAGACTCTTTCTGAATGTTGTAGTCA 8164 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | | || || | ||| || || ||||| || | | |||||||||||| Sbjct 8165 GCGAGAGTGCGACCGTCTTCAAGTTGCTTCCCAGCAAAGATAAGACGTTGTTGATCAGGA 8224 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||| ||||| || |||| || | ||| ||| || ||||| || || Sbjct 8225 GGGATACCCTCTTTGTCTTGAATCTTGGCCTTGACATTGTCAATTGTGTCGGAGGATTCG 8284 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGT 193336 ||||| ||||| || || ||||| || Sbjct 8285 ACTTCGAGAGTGATGGTCTTACCAGT 8310 Score = 93.3 bits (102), Expect = 8e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | || |||||||||| ||| | || | || || || || || ||| Sbjct 8397 ATACCACCACGCAGACGAAGTACCAAATGAAGAGTGGATTCCTTCTGGATGTTGTAATCG 8456 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || | ||| || | ||||||||||||||| || | | || || || || Sbjct 8457 GCCAGGGTACGTCCATCTTCGAGTTGTTTTCCGGCAAAGATAAGACGTTGCTGGTCTGGT 8516 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||||||||| || |||| || | ||| ||| ||||||||||| ||| Sbjct 8517 GGAATACCTTCTTTATCTTGAATCTTGGCCTTCACATTGTCAATGGTATCGGAAGATTCA 8576 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAG 193339 || || || || || || || || || || Sbjct 8577 ACCTCGAGGGTGATGGTCTTGCCGGTAAG 8605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899494452693360