Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq7247 116 7e-21 >seq7247 Length=24577 Score = 116 bits (128), Expect = 7e-21 Identities = 150/207 (72%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901 |||||| | ||||| || || || || | ||||| ||| || ||| || ||||| | Sbjct 6958 ACCACCACGCAGTCGCAAGACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAATCGGC 7017 Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961 | | ||| | || |||||||||||||| ||||| |||| || ||||||||| ||||| Sbjct 7018 AAGTGTTCGCCCATCCTCCAATTGTTTACCTGCAAAGATTAGTCGCTGTTGGTCTGGTGG 7077 Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021 || ||||| |||||||| || || || || || || ||||| || || || || Sbjct 7078 GATGCCTTCCTTATCTTGAATCTTGGCCTTGACGTTGTCAATTGTATCCGATGACTCGAC 7137 Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAA 172048 ||| || || ||||| || ||||| || Sbjct 7138 TTCGAGGGTGATGGTCTTGCCAGTCAA 7164 Score = 105 bits (116), Expect = 1e-17 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974 || |||||||| || ||||| ||||| |||| |||||||| ||||| || ||||| ||| Sbjct 7320 TCCTCCAATTGCTTTCCAGCGAAAATCAATCGTTGTTGGTCCGGTGGAATCCCTTCCTTA 7379 Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034 ||||| ||||| || ||||| ||||| || || ||||| ||||| || || || Sbjct 7380 TCTTGAATTTTGGCCTTGACATTGTCAATAGTGTCCGAAGATTCGACTTCCAGTGTGATT 7439 Query 172035 GTTTTACCAGT 172045 ||||||||||| Sbjct 7440 GTTTTACCAGT 7450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 904975078133400