Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq7247 98.7 8e-16 >seq7247 Length=24577 Score = 98.7 bits (108), Expect = 8e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 110293 TTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGACGATACTGTCGGCCAGGTAAA 110352 ||| || ||||| ||||| ||| ||||| ||| | ||||| | | | | || || Sbjct 7165 TTTGACTGGCAAGACCATCACCCTCGAAGTCGAGTCATCGGATACAATTGACAACGTCAA 7106 Query 110353 ACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGG 110412 |||||| || || |||||| | || || ||||| |||| || | ||| || Sbjct 7105 GGCCAAGATTCAAGATAAGGAAGGCATCCCACCAGACCAACAGCGACTAATCTTTGCAGG 7046 Query 110413 TAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTT 110472 |||||| ||||||||| ||||| | || ||||||||||||||||| || ||||| | Sbjct 7045 TAAACAATTGGAGGATGGGCGAACACTTGCCGATTACAACATTCAAAAGGAGTCTACTCT 6986 Query 110473 GCACATGGTGTTAAGACTGCGAGGGGG 110499 ||| |||| || ||||||| || || Sbjct 6985 TCACTTGGTCTTGCGACTGCGTGGTGG 6959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412770036875939