Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq7247 86.0 1e-11 >seq7247 Length=24577 Score = 86.0 bits (94), Expect = 1e-11 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 146055 ACAGGAAAAACAATTACTATTGATGTAGAA-CATAACGATACTATTCAAAATGTAAAAAA 146113 || || ||||||||||| | || || ||| ||| || || || | || || || Sbjct 8023 ACCGGTAAAACAATTACGCTGGAGGTTGAATCATCT-GACACCATCGACAACGTCAAGGC 7965 Query 146114 TAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAA 146173 ||||| || || ||||||||||| || ||||||||| | || || ||||| || || Sbjct 7964 CAAAATCCAGGACAAGGAAGGCATTCCCCCAGATCAACAACGTCTGATCTTTGCTGGGAA 7905 Query 146174 ACAATTAGATGATAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCA 146233 |||||| || ||| | | || | | ||||| ||||| ||||| ||||| ||| | || Sbjct 7904 ACAATTGGAAGATGGTCGCACACTCGCTGATTACAATATCCAAAAGGAATCAACTCTTCA 7845 Query 146234 TTTAGTATTACGATTAAGAGGAGG 146257 | | || | ||||| | ||||| Sbjct 7844 TCTTGTGCTCCGATTGCGTGGAGG 7821 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 ||||| ||| | || || || || || ||| ||| |||||||| ||||| || ||| Sbjct 7125 GATACAATTGACAACGTCAAGGCCAAGATTCAAGATAAGGAAGGCATCCCACCAGACCAA 7066 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 || |||| || ||||||||||||||||| || ||| |||| | | ||||| || Sbjct 7065 CAGCGACTAATCTTTGCAGGTAAACAATTGGAGGATGGGCGAACACTTGCCGATTACAAC 7006 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGA 146246 || ||||| || || ||| | || || || || ||| Sbjct 7005 ATTCAAAAGGAGTCTACTCTTCACTTGGTCTTGCGA 6970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786026629441160