Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq14164 91.5 2e-13 >seq14164 Length=14006 Score = 91.5 bits (100), Expect = 2e-13 Identities = 114/154 (74%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 193443 ATACCTGAAATAGGGGATAAATTTTGTTCAGGA-ATGGCCCAAAAAGGAACTTGTGGTAT 193501 |||||||||| ||| |||||||| ||| || |||| | | |||||||| || || Sbjct 7806 ATACCTGAAACAGGAGATAAATTCGCATCAAGACATGGAC-AGAAAGGAACGGTCGGAAT 7748 Query 193502 GATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTAT 193561 | ||| |||||||||||||||||| ||| || ||| || |||||||| || || Sbjct 7747 TTTATATAGACAAGAAGATATGCCATTCACATCTGAAGGGATTTGTCCAGATATCATCAT 7688 Query 193562 TAATCCAAATTGTATTCCATCCAGAATGACCATT 193595 |||||| || |||||||| ||||||| ||| Sbjct 7687 TAATCCTCATGCGATTCCATCTCGAATGACGATT 7654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635064673362440