Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq14164 82.4 1e-10 >seq14164 Length=14006 Score = 82.4 bits (90), Expect = 1e-10 Identities = 112/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 192996 ATACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCCCAAAAAGGAACTTGTGGTAT 193054 |||||||||| ||| |||||||| || || |||| | | |||||||| || || Sbjct 7806 ATACCTGAAACAGGAGATAAATTCGCATCAAGACATGGAC-AGAAAGGAACGGTCGGAAT 7748 Query 193055 GATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTAT 193114 | ||| |||||||||||||||||| ||| || ||| || |||||||| || || Sbjct 7747 TTTATATAGACAAGAAGATATGCCATTCACATCTGAAGGGATTTGTCCAGATATCATCAT 7688 Query 193115 TAATCCAAATTGTATTCCGTCCAGAATGACCATT 193148 |||||| || ||||| || ||||||| ||| Sbjct 7687 TAATCCTCATGCGATTCCATCTCGAATGACGATT 7654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628419455009280