Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq3259 96.9 8e-15 >seq3259 Length=9191 Score = 96.9 bits (106), Expect = 8e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 279875 GATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGTTGTTTCAAAAGAAAATTGGTA 279934 || || || |||||| || || ||| || |||| ||| |||||||| |||||| | Sbjct 5471 GACGGCTTCAAACCTGGTCAACGAAAGGTTTTATTTGCTTGCTTCAAAAGGAAATTGAAA 5412 Query 279935 AAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCAGAACATGCAGGTTATCATCAC 279994 ||| ||| || ||||| || | |||||| | | |||||| ||| |||||||||| Sbjct 5411 GCGGAGATTAAAGTAGCTCAATTGGGAGGTTACTGTGCCGAACATTCAGCTTATCATCAC 5352 Query 279995 GGTGAAGCGTCTCTTCAAGGTGCTATTGTAGGTCTTGCCCAAGATTTTATGGCTTCAAAC 280054 || ||| | |||| | | ||||| | |||||| ||| | ||| | | || Sbjct 5351 GGGGAACAGAGTCTTACACAAACGATTGTCGCTCTTGCACAAAACTTTGTCGGAAGCAAT 5292 Query 280055 AACTTAAATCTGCTTTCACCAAATGGTCAATTTGGT 280090 ||| | ||| |||||||||| ||||| ||||| ||| Sbjct 5291 AACATCAATGTGCTTTCACCTAATGGACAATTCGGT 5256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186596524507303