Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq4953 87.8 2e-12 >seq4953 Length=13799 Score = 87.8 bits (96), Expect = 2e-12 Identities = 205/304 (67%), Gaps = 8/304 (3%) Strand=Plus/Minus Query 31332 GGTCACGTAAAATTGAAATAACACATGACAAGGCGGCAAAGCCATTTCACAGGTATCGAC 31391 ||| || ||||| ||| | |||| |||||||||||| | ||||| | | ||| Sbjct 7933 GGTTACATAAAACTGACAAAACATATGACAAGGCGGAAGGGCCATCTTGGATAGATCAGA 7874 Query 31392 GGGATTCCAAGCGCTTACTAACAAACGCCGACTGGTTGGATCACGCTTAATCTCTTCTAT 31451 ||||||||||| |||| | || || ||| || || | | || |||| || || Sbjct 7873 TGGATTCCAAGCACTTAGGATCATCCGACGATCCGTAGGTTTGTGTTTGATCTTCTCGAT 7814 Query 31452 CACGGCTGTTATTTGATCGATTCCTTCACCCGTATAATTA-CTATCACATCCCTT--GTA 31508 || | | |||||| | ||||||||| ||||||| | || | | | || ||| Sbjct 7813 ACAATCTTTCAATTGATCTACTCCTTCACCGGTATAATCATCTTTGGC---CGTTCGGTA 7757 Query 31509 GGCTGCACCGAAATGTCGCCATTGAAACCCATAAATAGGTCCCAGGTCATGTTCTGGTCT 31568 | ||||||||||||||||| ||||| ||||| || ||||| || || ||| ||| Sbjct 7756 GCTCGCACCGAAATGTCGCCACTGAAATCCATAGATCGGTCCTAGATCTCCTTCATCTCT 7697 Query 31569 AGTGA-CCAGACCTCGTCCATCTAAAAATGATCGAGTTCCATTTTCTTGCCAAATCTTGA 31627 | ||| ||| || | |||| ||| | | | ||||||| | | |||||| |||| Sbjct 7696 A-TGACCCAATCCGACACTTTCTAGAAAAGTTTTCGATCCATTTCCATTCCAAATGTTGA 7638 Query 31628 TTCC 31631 ||| Sbjct 7637 CTCC 7634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512926391883440