Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq7247 98.7 7e-16 >seq7247 Length=24577 Score = 98.7 bits (108), Expect = 7e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 || ||||||||| |||| || |||||||| | || ||||||||||||||| | || Sbjct 8533 GATAAAGAAGGTATTCCACCAGACCAGCAACGTCTTATCTTTGCCGGAAAACAACTCGAA 8474 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | ||| | | || |||||||||||||||| || || |||| | |||||||| | Sbjct 8473 GATGGACGTACCCTGGCCGATTACAACATCCAGAAGGAATCCACTCTTCATTTGGTACTT 8414 Query 28003 CGTTTGCGTGGCGG 28016 ||| ||||||| || Sbjct 8413 CGTCTGCGTGGTGG 8400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355800713810721