Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq7247 89.7 4e-13 >seq7247 Length=24577 Score = 89.7 bits (98), Expect = 4e-13 Identities = 103/135 (76%), Gaps = 3/135 (2%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || || ||||||||||| ||| ||| ||||| ||||| || || || || || ||| || Sbjct 7547 CGCAATACCAAATGTAGGGTGGACTCCTTTTGAATATTGTAGTCAGCTAGCGTACGTCCG 7606 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTT 39188 || || |||||||| || || || |||||||| || || || |||||| | | ||| || Sbjct 7607 TCTTCCAGCTGTTTCCCGGCGAAAATAAGACGTTGTTGATCAGGTGGG-ATACCCTCCTT 7665 Query 39189 GTCCATGATTTTCTG 39203 |||| ||| ||| || Sbjct 7666 GTCC-TGAATTTTTG 7679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429471141357599