Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq11248 118 1e-21 >seq11248 Length=18918 Score = 118 bits (130), Expect = 1e-21 Identities = 162/224 (72%), Gaps = 7/224 (3%) Strand=Plus/Minus Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTT 23891 |||||| || ||||| || |||| |||||||| | |||||| || | ||||||| Sbjct 4586 AATCTGGAAGCCATAGAAGCATCGAGCTTCAGCCGCTTGAACCTCTCCACTGAATCTTTC 4527 Query 23892 AGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT 23951 | || |||||||| ||||| ||||| ||||||||||||||| || |||| ||| || Sbjct 4526 AATCAAGTTTTCGTTGACAATTCCATCCGAAGCAGCAAAGAAAGCTAGGACATGTTTGAT 4467 Query 23952 AAAATGTCTTTCATCAGTTGAT--AAT---TTTTTCCAATCATTAATATCTTTTGATAAA 24006 ||| ||| | |||||| | || ||| || | |||||| | ||||| || || | | Sbjct 4466 AAAGTGTTTCTCATCA--TCATTCAATCTGTTCTCCCAATCGTGCATATCCTTCGAAAGA 4409 Query 24007 TCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATA 24050 || | ||| || |||||||||| ||| ||| ||||| || Sbjct 4408 TCGATTTCTTCGGCTGTCCAAAATGAAGCCTCGGCTCGCTTGTA 4365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521395285952200