Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq16375 98.7 2e-15 >seq16375 Length=4551 Score = 98.7 bits (108), Expect = 2e-15 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 61081 GAATTTGTCAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAG 61140 || ||| |||||| || || || ||||| ||||| ||||| |||| ||||||||| | Sbjct 3685 GATTTTATCAAGCTTCTACTTCAGAACTTTATGGTAAAGTGGTCGAAACTCCTCAAACTG 3744 Query 61141 AAAGGACTCCGTTTTATCCTCGTAGCCCGTATGGTGTTGCAAAACTATA 61189 ||| ||||| || |||||||| || || ||||||||||||||||| || Sbjct 3745 AAAAAACTCCTTTCTATCCTCGAAGTCCCTATGGTGTTGCAAAACTTTA 3793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057427902761750