Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05-
22] 29,225 sequences; 62,222,430 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq24802 104 3e-17
>seq24802
Length=2283
Score = 104 bits (114), Expect = 3e-17
Identities = 245/367 (67%), Gaps = 6/367 (2%)
Strand=Plus/Plus
Query 53445 CGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATG 53504
||| ||| | || |||||||||| ||| | | || |||||| | ||| ||||
Sbjct 1806 CGTGATAGAGCGTCTCGAAGATCTGAGCATTCAATTTTTTGGCTTCCGGTGAATCGAATG 1865
Query 53505 GATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTAT 53564
|| || |||| ||| || ||||||||||| | || || || ||||| || | ||
Sbjct 1866 GAAGCTTCAAGATTTGAAAGGCATCTGCTAATCCGTTTACTCCGATTCCGATGGGACGAT 1925
Query 53565 GTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTAT 53624
||||| | || || ||| ||||||||| | || || ||||| | |||||| || ||
Sbjct 1926 GTCTCATGTTGGACTTTTTAGCTTCTGGGACGGGGTAGTAATTCACATCTATTATACGAT 1985
Query 53625 TGAGGTTTC---TGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTC 53681
| | ||| | |||| || ||| | ||| || | || || | |||||| | ||
Sbjct 1986 TCAAGTTCCACGTGAC--TTCCTTCG-TCACCTCGTGTAGCTTTTGGAAATCATAGACTC 2042
Query 53682 CATCTATTACAAACATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAG 53741
| || | | | || | || || || || ||||| |||||||| || ||||||| |
Sbjct 2043 CGTCGGTGATATACGTCGGCAGCGCGATCGAGGCCAGGTTACAAACCGCCACCTCATCTG 2102
Query 53742 CATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 53801
| | ||| | || |||||||| ||||| || |||||||||| || | || |
Sbjct 2103 GGGCTGAATACTCGATGATCTCAGTACAAAGGTTCGATGACTTGATGGTGCCAAGGTTCT 2162
Query 53802 GTTGATT 53808
||||||
Sbjct 2163 TTTGATT 2169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593504706078000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |