Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq28837 102 8e-17 >seq28837 Length=2583 Score = 102 bits (112), Expect = 8e-17 Identities = 150/212 (71%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 116657 GCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGG 116716 |||||||| ||||| ||||| | || ||| | || || || || || | | ||| ||| Sbjct 594 GCCGAGGCTTCGTTTTGGACAGCTGAAGAGATTGATCTTTCAAAAGATATGCACGATTGG 535 Query 116717 GAGCGC---TTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCC 116773 ||| | |||||||| ||||| || || ||||| ||||| | || || ||||| Sbjct 534 GAGAACAGGTTGAACGATGACGAGAAACACTTTATCAAACACGTCTTAGCTTTCTTCGCT 475 Query 116774 GCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTG 116833 || || || |||||||||||||| || | || | ||| | ||||| || | | Sbjct 474 GCTTCAGATGGAATCGTCAACGAGAACTTGATTGAAAGATTCAGTGGAGAGGTTCAAGCG 415 Query 116834 GCCGAGGCGCGGTGCTTCTACGGCTTTCAGAT 116865 || || || || |||||||| ||||||||||| Sbjct 414 GCAGAAGCCCGATGCTTCTATGGCTTTCAGAT 383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515030983986000