Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05-
22] 29,225 sequences; 62,222,430 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq28837 102 8e-17
>seq28837
Length=2583
Score = 102 bits (112), Expect = 8e-17
Identities = 150/212 (71%), Gaps = 3/212 (1%)
Strand=Plus/Minus
Query 116657 GCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGG 116716
|||||||| ||||| ||||| | || ||| | || || || || || | | ||| |||
Sbjct 594 GCCGAGGCTTCGTTTTGGACAGCTGAAGAGATTGATCTTTCAAAAGATATGCACGATTGG 535
Query 116717 GAGCGC---TTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCC 116773
||| | |||||||| ||||| || || ||||| ||||| | || || |||||
Sbjct 534 GAGAACAGGTTGAACGATGACGAGAAACACTTTATCAAACACGTCTTAGCTTTCTTCGCT 475
Query 116774 GCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTG 116833
|| || || |||||||||||||| || | || | ||| | ||||| || | |
Sbjct 474 GCTTCAGATGGAATCGTCAACGAGAACTTGATTGAAAGATTCAGTGGAGAGGTTCAAGCG 415
Query 116834 GCCGAGGCGCGGTGCTTCTACGGCTTTCAGAT 116865
|| || || || |||||||| |||||||||||
Sbjct 414 GCAGAAGCCCGATGCTTCTATGGCTTTCAGAT 383
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515030983986000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |