Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05-
22] 29,225 sequences; 62,222,430 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq20492 109 8e-19
>seq20492
Length=5790
Score = 109 bits (120), Expect = 8e-19
Identities = 245/359 (68%), Gaps = 18/359 (5%)
Strand=Plus/Minus
Query 205561 ACATGAAATTGTACAAAACA-ATGACAAGGTGGTATAACCATATTTTCAACATCTATAGG 205619
|||| |||||| |||||||| ||||||||| || | |||| || | ||| |||
Sbjct 908 ACATAAAATTG-ACAAAACATATGACAAGGAGGAAGTGCCATTTTAGATAAATCAGAAGG 850
Query 205620 ATTCCAGGCTGTTAATATTATATTTCTAGATTCA---GGtttattttttattttatttat 205676
|||||| || |||| || || |||| ||| || ||| || ||||||| ||
Sbjct 849 ATTCCAAGCACTTAAAATGAT---TCTACGATCAATTGGATTAAATTGAATTTTATGAAT 793
Query 205677 AATATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAAT---ATA 205733
| | | |||||||||||| |||| || || || ||| || | | |||
Sbjct 792 ACACTCTTTTAATTGATCAATACCTT---TTCCATGATAATCATCTTTAAAAGTTTTATA 736
Query 205734 TTTAGCACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTCTTTTCT 205793
|| ||||||||||| | ||||||||| ||||||| || |||| ||| |||||| |||
Sbjct 735 TTCTGCACCAAAATGTCTCCATTGAAATCCATAAATCGGTCCTAGATCTCCTTCTGATCT 676
Query 205794 ATCATTAAAACCACGtttttttatatattttaatgatccattttcatcccaaatatggat 205853
|| | || || | |||| ||| || ||||||||| ||| ||| |||| |
Sbjct 675 TTCTGTTAATCCTATACTCTTTAAATAAGTTTGAGATCCATTTCCATTCCAGATATTCAC 616
Query 205854 tcctttattttttaGAATATTTGT-ATTA-GTTGATCCAGATATAAACCATAATAATTC 205910
||||| || | | ||| | || || | |||||||| ||||||||||| ||||||
Sbjct 615 TCCTT--TTGATGATAATTCTAGTGATGAGGTTGATCCTTTTATAAACCATAGTAATTC 559
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755180022480000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |