Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq20492 123 2e-23 >seq20492 Length=5790 Score = 123 bits (136), Expect = 2e-23 Identities = 273/404 (68%), Gaps = 4/404 (1%) Strand=Plus/Plus Query 20044 TTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTATGG 20103 || || ||| |||| || ||| || ||| |||| | | | | || ||| ||||| Sbjct 511 TTACCATTACTAACCACCAAAAAAGTCTTTACAAAAGCCATCATACATGAATTACTATGG 570 Query 20104 TTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGGAGC 20163 ||||| ||||||||||| || || | | ||||||||| || || |||| Sbjct 571 TTTATAAAAGGATCAACCTCATCACTAGAATTATCATCAAAAGGAGTGAATATCTGGAAT 630 Query 20164 GCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTG-ACAACCGTCAAGAGGGGGA 20222 | | |||||||| | | |||| | || | ||||| | || ||| || || || Sbjct 631 GGAAATGGATCTCAAACTTATTTAAAGAGTATAGGATTAACAGAAAGATCA-GAAGGAGA 689 Query 20223 TTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATGAA 20282 | | || || | |||||||||||||||||||||||||| || |||||| || | | Sbjct 690 TCTAGGACCGATTTATGGATTTCAATGGAGACATTTTGGTGCAGAATAT-AAAACTTTTA 748 Query 20283 CACA-AATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAAA 20341 | | ||||| |||| |||| | ||||||||| || | |||| || |||| || Sbjct 749 AAGATGATTATCATGGAAAAGGTATTGATCAATTAAAAGAGTGTATTCATAAAATTCAAT 808 Query 20342 CGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTAA 20401 || |||| || | ||||| |||||| | || ||||| || ||| | || || Sbjct 809 TTAATCCAATTGATCGTAGAATCATTTTAAGTGCTTGGAATCCTTCTGATTTATCTAAAA 868 Query 20402 TGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCT 20445 |||| | ||||| ||||||||| | || |||||||| ||| || Sbjct 869 TGGCACTTCCTCCTTGTCATATGTTTTGTCAATTTTATGTTACT 912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399041818767625