Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq20492 89.7 7e-13 >seq20492 Length=5790 Score = 89.7 bits (98), Expect = 7e-13 Identities = 141/201 (70%), Gaps = 6/201 (3%) Strand=Plus/Plus Query 104404 GATTTAGGACCTATTTATGGTTTTCAGTGGAGACATTATGGTGAAAATTATATTGGGTGC 104463 ||| ||||||| |||||||| ||||| |||||||||| ||||| | | |||| | Sbjct 688 GATCTAGGACCGATTTATGGATTTCAATGGAGACATTTTGGTGCAGAATATAAAACTTTT 747 Query 104464 ---GATAATAAATATGGT---GGTATAGATCAACTCAAAAATATTATTACAACAATTCAA 104517 ||| || | |||| ||||| |||||| | ||| | |||| | ||||||| Sbjct 748 AAAGATGATTATCATGGAAAAGGTATTGATCAATTAAAAGAGTGTATTCATAAAATTCAA 807 Query 104518 AATGAACCTTGGGATAGAAGAATGATATTATTAGCTTGGAACCCAAAGGATAATTCTAAA 104577 | | || ||| | ||||| || ||| |||||||| || ||| |||||| Sbjct 808 TTTAATCCAATTGATCGTAGAATCATTTTAAGTGCTTGGAATCCTTCTGATTTATCTAAA 867 Query 104578 ATGGCACTTCCTCCTTGTCAT 104598 ||||||||||||||||||||| Sbjct 868 ATGGCACTTCCTCCTTGTCAT 888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679566055302000