Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq28837 91.5 1e-13 >seq28837 Length=2583 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 57591 GCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGG 57650 || || || ||||||||||| | ||||| | || || || || ||| || ||||||| Sbjct 594 GCCGAGGCTTCGTTTTGGACAGCTGAAGAGATTGATCTTTCAAAAGATATGCACGATTGG 535 Query 57651 GATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCC 57707 || | | || || |||| | | ||||| |||||||| || || || ||||| Sbjct 534 GAGAACAGGTTGAACGATGACGAGAAACACTTTATCAAACACGTCTTAGCTTTCTTCGCT 475 Query 57708 GCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTG 57767 || || ||||| || || |||||||| ||| | |||||||| ||| || |||| | Sbjct 474 GCTTCAGATGGAATCGTCAACGAGAACTTGATTGAAAGATTCAGTGGAGAGGTTCAAGCG 415 Query 57768 ACGGAGGCGAGATGCTTTTACGGATTTCA 57796 | || || ||||||| || || ||||| Sbjct 414 GCAGAAGCCCGATGCTTCTATGGCTTTCA 386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445603555962000