Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq24802 100 4e-16 >seq24802 Length=2283 Score = 100 bits (110), Expect = 4e-16 Identities = 336/520 (65%), Gaps = 6/520 (1%) Strand=Plus/Plus Query 79202 TGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGAT 79261 |||| || ||||| ||| ||||| | ||| || || || || ||| ||| | || Sbjct 1653 TGATCTTTTCTTTCAGATCATCCCATTTCCACAGGTCGGAGGGTGTAACGCCCCACATAT 1712 Query 79262 CATATTGTAGAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCT 79321 ||||||| || || ||||||| || || | | ||||| || | |||||| Sbjct 1713 CATATTGGAGTTCTCCTAAACTAGCGGGCGAACCGGGAAACGTTTCGTATGCGCCTTCCG 1772 Query 79322 TTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCT 79381 |||| | || || || | ||| ||| ||| | || ||||| |||| Sbjct 1773 ACACGGCAAGCTCGTTTGAGGCTTCAAGGGCTGCGTGATAGAGCGTCTCGAAGATCTGAG 1832 Query 79382 TATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTG 79441 ||| | | || ||||| | ||| |||||| || |||| ||| || |||| Sbjct 1833 CATTCAATTTTTTGGCTTCCGGTGAATCGAATGGAAGCTTCAAGATTTGAAAGGCATCTG 1892 Query 79442 CTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTG 79501 ||||||| | || || || ||||| || | ||||||| | || || ||| |||||||| Sbjct 1893 CTAATCCGTTTACTCCGATTCCGATGGGACGATGTCTCATGTTGGACTTTTTAGCTTCTG 1952 Query 79502 GAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCC---TGACTATTACTTTGA 79558 | | || || ||||| | |||||| || ||| | |||| |||| || ||| | Sbjct 1953 GGACGGGGTAGTAATTCACATCTATTATACGATTCAAGTTCCACGTGAC--TTCCTTCG- 2009 Query 79559 CCACATCCTTTAGTTTGAGAAAATCAAATCGTCCATCTATTACAAACATGTTCAACGCGA 79618 ||| || | ||| || | |||||| | ||| || | | | || | || ||||| Sbjct 2010 TCACCTCGTGTAGCTTTTGGAAATCATAGACTCCGTCGGTGATATACGTCGGCAGCGCGA 2069 Query 79619 CAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGC 79678 || ||||| |||||||| || ||||||| | | | ||| | || || ||||| | Sbjct 2070 TCGAGGCCAGGTTACAAACCGCCACCTCATCTGGGGCTGAATACTCGATGATCTCAGTAC 2129 Query 79679 AGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATT 79718 | ||||| |||| ||||| || | || | |||||| Sbjct 2130 AAAGGTTCGATGACTTGATGGTGCCAAGGTTCTTTTGATT 2169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718006407429000