Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq16220 105 2e-17 >seq16220 Length=1922 Score = 105 bits (116), Expect = 2e-17 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 104381 TTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGT 104440 || || |||| || || | |||||||| ||||||||||| || || || | | ||| Sbjct 3 TTGTAATCAGCAAGGGTACGTCCGTCTTCAAGTTGTTTTCCGGCGAAGATCAAACGTTGT 62 Query 104441 TGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCG 104500 ||||| || || || ||||||||||| || ||||| || || || || || | ||||||| Sbjct 63 TGATCCGGTGGAATACCTTCTTTATCTTGGATCTTGGCCTTGACGTTGTCAATGGTATCG 122 Query 104501 CTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAG 104538 || ||| ||||| || || |||||||| || || || Sbjct 123 GAAGATTCGACCTCGAGGGTGATAGTCTTCCCGGTTAG 160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1150967264266300