Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05-
22] 29,225 sequences; 62,222,430 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq16375 104 4e-17
>seq16375
Length=4551
Score = 104 bits (114), Expect = 4e-17
Identities = 146/203 (72%), Gaps = 4/203 (2%)
Strand=Plus/Plus
Query 193968 TCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAAGATC 194027
||||||||| |||| || ||||||||||||||||| || | || | || |||||
Sbjct 4071 TCTCCAAGACGAGGAAGAACTTTTGTAACTCGTAAGATCACGCGAGCAGTGGCTGAGATC 4130
Query 194028 TCTGTTGGATTACAGAAGATT--CTTTATCTTGGTAATCTTAATGCTAAGAGGGATTGGG 194085
| || || || | || ||||| ||||| ||| | || || || |||||||
Sbjct 4131 AGCCTAGGTTTGCA--ATCTTGCCTTTACCTTGGAAATTTATCGGCCAAAAGAGATTGGG 4188
Query 194086 GACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTTGCAACAGGATGAACCCGATG 194145
| || || || ||||||||||||| |||||| |||||| ||||| |||| | | || |
Sbjct 4189 GGCATGCCAAAGATTATGTTGAAGGCATGTGGCGAATGTTACAACAAGATGTAGCAGAAG 4248
Query 194146 ATTATGTGATTGCTACAGGTGAA 194168
| ||||| | ||||| ||||||
Sbjct 4249 ACTATGTTTTAGCTACCGGTGAA 4271
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807260189991000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |