Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05-
22] 29,225 sequences; 62,222,430 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq20492 113 1e-19
>seq20492
Length=5790
Score = 113 bits (124), Expect = 1e-19
Identities = 164/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 111485 AGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAA 111544
|||||| ||||| ||||| |||| |||||||||||| | || ||||||||||| || ||
Sbjct 681 AGAAGGAGATCTAGGACCGATTTATGGATTTCAATGGAGACATTTTGGTGCAGAATATAA 740
Query 111545 AACCATGCACGACTCATATGATTCACAGGGAACTGATCAATT-ACAGAATGTCATTGATC 111603
||| | | || ||| || | | || | ||||||||| | ||| ||| ||| ||
Sbjct 741 AACTTTTAAAGATGATTATCATGGAAAAGGTATTGATCAATTAAAAGAGTGT-ATTCATA 799
Query 111604 AAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCAT 111663
||||| | || |||| | |||| | || ||| | ||||| ||||| || || |
Sbjct 800 AAATTCAATTTAATCCAATTGATCGTAGAATCATTTTAAGTGCTTGGAATCCTTCTGATT 859
Query 111664 TGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712
| |||||||||||||| || |||||| | | || || ||||||||
Sbjct 860 TATCTAAAATGGCACTTCCTCCTTGTCATATGTTTTGTCAATTTTATGT 908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1302865565353950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |