Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq20492 113 1e-19 >seq20492 Length=5790 Score = 113 bits (124), Expect = 1e-19 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 111485 AGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAA 111544 |||||| ||||| ||||| |||| |||||||||||| | || ||||||||||| || || Sbjct 681 AGAAGGAGATCTAGGACCGATTTATGGATTTCAATGGAGACATTTTGGTGCAGAATATAA 740 Query 111545 AACCATGCACGACTCATATGATTCACAGGGAACTGATCAATT-ACAGAATGTCATTGATC 111603 ||| | | || ||| || | | || | ||||||||| | ||| ||| ||| || Sbjct 741 AACTTTTAAAGATGATTATCATGGAAAAGGTATTGATCAATTAAAAGAGTGT-ATTCATA 799 Query 111604 AAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCAT 111663 ||||| | || |||| | |||| | || ||| | ||||| ||||| || || | Sbjct 800 AAATTCAATTTAATCCAATTGATCGTAGAATCATTTTAAGTGCTTGGAATCCTTCTGATT 859 Query 111664 TGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGT 111712 | |||||||||||||| || |||||| | | || || |||||||| Sbjct 860 TATCTAAAATGGCACTTCCTCCTTGTCATATGTTTTGTCAATTTTATGT 908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302865565353950