Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq22791 89.7 7e-13 >seq22791 Length=2131 Score = 89.7 bits (98), Expect = 7e-13 Identities = 139/197 (71%), Gaps = 4/197 (2%) Strand=Plus/Plus Query 63783 CATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGAT 63842 |||| || | | ||| || || || | ||||| |||||||| || |||||||| |||| Sbjct 826 CATATCTGTAAAGATCTTCAATGACCTGGCTAAAGAGTTTTTTGGTCTCTTTGTGAAGAT 885 Query 63843 T--TGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGT 63900 | ||||| || || | ||||| || | || ||||| |||||| | ||||| | Sbjct 886 TACTGATA--GCGATCCGCGCGGCAAGCACAGCGTAATCAGGATGTCGCGTAGTCATATA 943 Query 63901 GGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCC 63960 || || | || ||||||| | |||||||| || |||||||||||||| | | || Sbjct 944 AGCAGCGGTCTCAGCTGCCAAGTTATCCAATTCAACTGTTGTTACACCATTGAAAACGCC 1003 Query 63961 TTGGATAACCTTCATAG 63977 | ||| || ||| ||| Sbjct 1004 GTTGATGACTTTCTTAG 1020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633400526310000