Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq28837 100 3e-16 >seq28837 Length=2583 Score = 100 bits (110), Expect = 3e-16 Identities = 151/214 (71%), Gaps = 3/214 (1%) Strand=Plus/Plus Query 93415 AATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTC 93474 ||| || || || ||||| |||| ||||| | || || ||| | ||||| || Sbjct 382 AATCTGAAAGCCATAGAAGCATCGGGCTTCTGCCGCTTGAACCTCTCCACTGAATCTTTC 441 Query 93475 TACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTAT 93534 | | || || ||||| || ||||| || || || || ||||| || | || || || Sbjct 442 AATCAAGTTCTCGTTGACGATTCCATCTGAAGCAGCGAAGAAAGCTAAGACGTGTTTGAT 501 Query 93535 AAAATGTTTCTCATCATCTTTAAGC---TTATCCCAATCGGATAGATCTTTTGAAAGATC 93591 ||| |||||||| ||||| || | | || ||||||||| | ||||||||||||||| Sbjct 502 AAAGTGTTTCTCGTCATCGTTCAACCTGTTCTCCCAATCGTGCATATCTTTTGAAAGATC 561 Query 93592 GACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 | ||||| | ||||||||||| || || ||| Sbjct 562 AATCTCTTCAGCTGTCCAAAACGAAGCCTCGGCT 595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556657371789000