Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq16220 89.7 4e-13 >seq16220 Length=1922 Score = 89.7 bits (98), Expect = 4e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 22241 TAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAAC 22300 ||||||| || || |||| || || || ||| | |||||||| | ||| | |||| Sbjct 159 TAACCGGGAAGACTATCACCCTCGAGGTCGAATCTTCCGATACCATTGACAACGTCAAGG 100 Query 22301 AAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCA 22360 || || ||||| || || ||||||||||| |||||||||||| | || || ||||| | Sbjct 99 CCAAGATCCAAGATAAAGAAGGTATTCCACCGGATCAACAACGTTTGATCTTCGCCGGAA 40 Query 22361 AACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACA 22399 |||| | || || || ||| | | |||||||||| Sbjct 39 AACAACTTGAAGACGGACGTACCCTTGCTGATTACAACA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419578501412125