Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq16220 104 4e-17 seq25279 93.3 8e-14 >seq16220 Length=1922 Score = 104 bits (114), Expect = 4e-17 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 68339 TTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGT 68398 ||||||||| ||||| ||||| |||||||| |||||||| || |||||| |||||||| Sbjct 408 TTGTTGGTCTGGTGGGATGCCCTCCTTGTCCTGAATCTTGGCTTTGACGTTGTCGATGGT 467 Query 68399 GTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAG 68440 ||| | ||||| || || | |||||||||||| || ||||| Sbjct 468 GTCAGAAGATTCAACCTCGAGGGTGATGGTTTTGCCGGTGAG 509 >seq25279 Length=2861 Score = 93.3 bits (102), Expect = 8e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 68331 ATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCC 68390 ||||||| ||||||||| || |||||||||||||| ||||||||||| | ||| || Sbjct 2145 ATGAGTCGTTGTTGGTCCGGGGGAATGCCTTCCTTTTCTTGAATCTTGGTCTTCACATTG 2086 Query 68391 TCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 || || ||||| || | ||| || || | ||||| || || ||||||||| Sbjct 2085 TCAATTGTGTCGGCAGCTTCGACCTCGAGAGTGATAGTCTTACCCGTGAGG 2035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921285719817000