Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq16375 87.8 4e-12 >seq16375 Length=4551 Score = 87.8 bits (96), Expect = 4e-12 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 68398 GAATTTGCCAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGG 68457 || ||| ||||| ||| | ||||| | ||||| |||||| |||| |||||| || | Sbjct 3685 GATTTTATCAAGCTTCTACTTCAGAACTTTATGGTAAAGTGGTCGAAACTCCTCAAACTG 3744 Query 68458 AAAATACTCCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAA 68500 |||| ||||| || ||||||||||| || || ||||||||||| Sbjct 3745 AAAAAACTCCTTTCTATCCTCGAAGTCCCTATGGTGTTGCAAA 3787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102467031753750