Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05-
22] 29,225 sequences; 62,222,430 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq24802 104 3e-17
>seq24802
Length=2283
Score = 104 bits (114), Expect = 3e-17
Identities = 317/482 (66%), Gaps = 16/482 (3%)
Strand=Plus/Plus
Query 114103 CCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGG 114162
|||||||||| | ||||| ||| || ||||| || ||| || |||||||
Sbjct 1705 CCACATATCATATTGGAGTTCTCCTAAACTAGCGGGCGAACCGGGAAACGTTTCGTATGC 1764
Query 114163 GCCCTCAACCTCCGCCAATTCG---GAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTC 114219
||| || | | || | ||| ||| || || |||||||||||||| | |||||
Sbjct 1765 GCCTTCCGACACGGCAAGCTCGTTTGAG---GCTTCAAGGGCTGCGTGATAGAGCGTCTC 1821
Query 114220 AAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAAT 114279
|| || ||||||||| | ||||| || ||||| || | || | || | |
Sbjct 1822 GAAGATCTGAGCATTCAATTTTTTGGCTTCCGGTGAATCGAATGGAAG-CTTCAAGATTT 1880
Query 114280 -AAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACT 114338
||| |||| || | || | || |||| || || || ||||||||||| || ||||
Sbjct 1881 GAAAGGCATCTGCTAATCCGTTTACTCCGATTCCGATGGGACGATGTCTCATGTTGGACT 1940
Query 114339 TTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTG 114397
|| ||| ||| ||||| || ||||| ||| || | | ||| | || |||
Sbjct 1941 TTTTAGCT-TCTGGGACGGGGTAGTAATTCACATCTATTATACGATTCAAGTTCCACGTG 1999
Query 114398 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACA 114457
|| |||| || | || || ||||||| | ||||| | || || | || ||| |
Sbjct 2000 ACTTCCTTCGTCACCTCGTGTAGCTTTTGGAAATCATA-----GACTC-CGTCGGTGATA 2053
Query 114458 TACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTAC 114517
||| | || || ||||| || ||||| ||||| || | |||||| | | |||
Sbjct 2054 TACGTCGGCAGCGCGATCGAGGCCAGGTTACAAACCGCCACCTCATCTGGGGCTGAATAC 2113
Query 114518 TCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGAC 114577
|| || || || ||||| | || || ||| |||||||| | |||||||||||| ||
Sbjct 2114 TCGATGATCTCAGTACAAAGGTTCGATGACTTGATGGTGCCAAGGTTCTTTTGATTCGAT 2173
Query 114578 TT 114579
||
Sbjct 2174 TT 2175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597135379263000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |