Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05-
22] 29,225 sequences; 62,222,430 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq16220 98.7 9e-16
>seq16220
Length=1922
Score = 98.7 bits (108), Expect = 9e-16
Identities = 105/136 (77%), Gaps = 2/136 (1%)
Strand=Plus/Plus
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || | ||||||||| ||| | ||||| ||||| || ||||| ||||| |||||||||
Sbjct 27 TCTTCAAGTTGTTTTCCGGCGAAGATCAAACGTTGTTGATCCGGTGGAATACCTTCTTTA 86
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||| || || |||| || | || | ||| |||||||| ||||| ||||| || |
Sbjct 87 TCTTGGATCTTGGCCTTGA-CGTTGTCAATGGTATCGGAAGATTCGACCTCGAGGGTGAT 145
Query 45305 CGTTTTGCCGGTTAGA 45320
|| || |||||||||
Sbjct 146 AGTCTTCCCGGTTAGA 161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451838077581000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |