Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq16220 98.7 9e-16 >seq16220 Length=1922 Score = 98.7 bits (108), Expect = 9e-16 Identities = 105/136 (77%), Gaps = 2/136 (1%) Strand=Plus/Plus Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || || | ||||||||| ||| | ||||| ||||| || ||||| ||||| ||||||||| Sbjct 27 TCTTCAAGTTGTTTTCCGGCGAAGATCAAACGTTGTTGATCCGGTGGAATACCTTCTTTA 86 Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| || || |||| || | || | ||| |||||||| ||||| ||||| || | Sbjct 87 TCTTGGATCTTGGCCTTGA-CGTTGTCAATGGTATCGGAAGATTCGACCTCGAGGGTGAT 145 Query 45305 CGTTTTGCCGGTTAGA 45320 || || ||||||||| Sbjct 146 AGTCTTCCCGGTTAGA 161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451838077581000