Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq27080 102 2e-16 >seq27080 Length=11697 Score = 102 bits (112), Expect = 2e-16 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| || || || ||||||||||||| |||||||||||||||||| | |||||| Sbjct 4693 AGGACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCCAAAGTGCGGCCATCT 4752 Query 199478 TCCAGCTGCTTTCCGGCGA 199496 || |||||||||||||||| Sbjct 4753 TCGAGCTGCTTTCCGGCGA 4771 Score = 84.2 bits (92), Expect = 5e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 200942 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 201001 |||||||||||||| | |||||||| | |||||||| || |||||| |||| || |||| Sbjct 4771 TCGCCGGAAAGCAGCTCGAAGATGGCCGCACTTTGGCTGACTACAACATCCAAAAGGAGT 4712 Query 201002 CTACTCTTCACCTTGT 201017 |||| ||||| ||||| Sbjct 4711 CTACCCTTCATCTTGT 4696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178480158333075