Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05-
22] 29,225 sequences; 62,222,430 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq28837 95.1 1e-14
>seq28837
Length=2583
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/213 (70%), Gaps = 3/213 (1%)
Strand=Plus/Plus
Query 133219 ATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCG 133278
|| |||||||| || ||||| || || || || | || || ||| | ||| | ||
Sbjct 383 ATCTGAAAGCCATAGAAGCATCGGGCTTCTGCCGCTTGAACCTCTCCACTGAATCTTTCA 442
Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338
| || || ||||||||||| || || || ||||| || || | ||||| |||||
Sbjct 443 ATCAAGTTCTCGTTGACGATTCCATCTGAAGCAGCGAAGAAAGCTAAGACGTGTTTGATA 502
Query 133339 AAATGGCGCTCGTTGTCGTTCAA---GCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCC 133395
|| || ||||| |||||||| | |||||| ||| || | || || || || ||
Sbjct 503 AAGTGTTTCTCGTCATCGTTCAACCTGTTCTCCCAATCGTGCATATCTTTTGAAAGATCA 562
Query 133396 ACCTCCTCGACGGTCCAAAACGACGCCTCGGCT 133428
| ||| || | ||||||||||| |||||||||
Sbjct 563 ATCTCTTCAGCTGTCCAAAACGAAGCCTCGGCT 595
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499990080624000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |