Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05-
22] 29,225 sequences; 62,222,430 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq16220 100 1e-15
seq8761 96.9 1e-14
>seq16220
Length=1922
Score = 100 bits (110), Expect = 1e-15
Identities = 117/158 (74%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 391071 CTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATTAAA 391130
|| || || || ||||| || || || || ||||| || |||| |||||| | ||
Sbjct 160 CTAACCGGGAAGACTATCACCCTCGAGGTCGAATCTTCCGATACCATTGACAACGTCAAG 101
Query 391131 CAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGG 391190
|| || |||||||| ||||| ||||| || |||||||||||||| || ||| | ||
Sbjct 100 GCCAAGATCCAAGATAAAGAAGGTATTCCACCGGATCAACAACGTTTGATCTTCGCCGGA 41
Query 391191 AAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228
|||||||||||||| ||| | || | || ||||| ||
Sbjct 40 AAACAACTTGAAGACGGACGTACCCTTGCTGATTACAA 3
>seq8761
Length=3720
Score = 96.9 bits (106), Expect = 1e-14
Identities = 109/145 (75%), Gaps = 2/145 (1%)
Strand=Plus/Plus
Query 248475 AAATT--CAACTAAACATGGACAAAAAGGAACAGTTGGTATTACTTTGCCACAAAGAGAT 248532
||||| || ||| ||||||||||||||| ||||| || ||| | |||| ||||
Sbjct 1876 AAATTTGCATCTAGACATGGACAAAAAGGTACAGTAGGGATTTTATATAGACAAGAAGAT 1935
Query 248533 ATGCCTTTCACATCAGAAGGTATGACTCCAGATTTAATTTTCAATCCACATGGTATGCCT 248592
||||| || ||||| ||||| || ||| ||| | ||| | ||||| |||| ||| ||
Sbjct 1936 ATGCCATTTACATCTGAAGGAATTTGTCCGGATATCATTATTAATCCTCATGCTATCCCA 1995
Query 248593 ACACGTATGACTATGGGACAATTAG 248617
|||||||||| || ||||| ||||
Sbjct 1996 TCACGTATGACGATTGGACATTTAG 2020
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1974978601506300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |