Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq7194 129 7e-25 >seq7194 Length=2292 Score = 129 bits (142), Expect = 7e-25 Identities = 131/171 (77%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 153258 GTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAG 153317 |||||||| || ||| ||||||||| |||||||||||| || |||| |||||||| Sbjct 2058 GTTCTTGAAAACCCTGCTTGGTACACGAGTTACACTCCCTACCAGCCTGAAATATCTCAA 2117 Query 153318 GGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTTACAGGATTACCA 153377 || |||||||| |||| |||||||||| || | |||| || ||||| ||| || Sbjct 2118 GGCAGATTGGAGTCTTTGATCAATTACCAGACAATGATCAGCTCGCTCACAGGCTTATCA 2177 Query 153378 ATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 153428 || | || ||||| ||||||| ||||||||||| || || ||||| ||| Sbjct 2178 ATTTCTAATGCATCATTATTAGACGAAGCAACTGCTGCCGCTGAAGCTATG 2228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579001206324000