Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq7194 123 3e-23 >seq7194 Length=2292 Score = 123 bits (136), Expect = 3e-23 Identities = 130/171 (76%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 157933 GTTCTTGAGAATCCTAGTTGGTACACATCTTACACTCCCTATCAAGCTGAGATATCTCAG 157992 |||||||| || ||| ||||||||| |||||||||||| || |||| |||||||| Sbjct 2058 GTTCTTGAAAACCCTGCTTGGTACACGAGTTACACTCCCTACCAGCCTGAAATATCTCAA 2117 Query 157993 GGAAGATTGGAAGCTTTATTCAATTACCAAACGCTCATCACAGAACTCACAGGACTACCG 158052 || |||||||| |||| |||||||||| || | |||| |||||||| || | Sbjct 2118 GGCAGATTGGAGTCTTTGATCAATTACCAGACAATGATCAGCTCGCTCACAGGCTTATCA 2177 Query 158053 ATAGCAAACGCATCTCTATTAGATGAAGCAACTGCAGCAGCAGAAGCAATG 158103 || | || ||||| ||||||| ||||||||||| || || ||||| ||| Sbjct 2178 ATTTCTAATGCATCATTATTAGACGAAGCAACTGCTGCCGCTGAAGCTATG 2228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587836377546000