Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq28837 93.3 6e-14 >seq28837 Length=2583 Score = 93.3 bits (102), Expect = 6e-14 Identities = 148/212 (70%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 18482 ATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTATAAAATCTTTCT 18541 |||||||| | ||| || ||| || || | ||||| ||| | | |||||||| Sbjct 383 ATCTGAAAGCCATAGAAGCATCGGGCTTCTGCCGCTTGAACCTCTCCACTGAATCTTTCA 442 Query 18542 ACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACATATTTAATG 18601 | ||| ||||| || || || || || | || ||||| || || || || | ||| || Sbjct 443 ATCAAGTTCTCGTTGACGATTCCATCTGAAGCAGCGAAGAAAGCTAAGACGTGTTTGATA 502 Query 18602 AAATGTTTTTCATTATCCTTGAGATTGTTC---CATTCATCTATATCTTTTGATAGATCA 18658 || ||||| || | ||| || | ||||| || || | ||||||||||| |||||| Sbjct 503 AAGTGTTTCTCGTCATCGTTCAACCTGTTCTCCCAATCGTGCATATCTTTTGAAAGATCA 562 Query 18659 ACTTCTTCCGATGTCCAAAAAGATGATTCGGC 18690 | ||||| | ||||||||| || | ||||| Sbjct 563 ATCTCTTCAGCTGTCCAAAACGAAGCCTCGGC 594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731604638010000