Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05-
22] 29,225 sequences; 62,222,430 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq28837 93.3 6e-14
>seq28837
Length=2583
Score = 93.3 bits (102), Expect = 6e-14
Identities = 148/212 (70%), Gaps = 3/212 (1%)
Strand=Plus/Plus
Query 18482 ATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTCGCTATAAAATCTTTCT 18541
|||||||| | ||| || ||| || || | ||||| ||| | | ||||||||
Sbjct 383 ATCTGAAAGCCATAGAAGCATCGGGCTTCTGCCGCTTGAACCTCTCCACTGAATCTTTCA 442
Query 18542 ACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCAAAACATATTTAATG 18601
| ||| ||||| || || || || || | || ||||| || || || || | ||| ||
Sbjct 443 ATCAAGTTCTCGTTGACGATTCCATCTGAAGCAGCGAAGAAAGCTAAGACGTGTTTGATA 502
Query 18602 AAATGTTTTTCATTATCCTTGAGATTGTTC---CATTCATCTATATCTTTTGATAGATCA 18658
|| ||||| || | ||| || | ||||| || || | ||||||||||| ||||||
Sbjct 503 AAGTGTTTCTCGTCATCGTTCAACCTGTTCTCCCAATCGTGCATATCTTTTGAAAGATCA 562
Query 18659 ACTTCTTCCGATGTCCAAAAAGATGATTCGGC 18690
| ||||| | ||||||||| || | |||||
Sbjct 563 ATCTCTTCAGCTGTCCAAAACGAAGCCTCGGC 594
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731604638010000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |