Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq10901 120 9e-22 >seq10901 Length=2100 Score = 120 bits (132), Expect = 9e-22 Identities = 252/375 (67%), Gaps = 3/375 (1%) Strand=Plus/Minus Query 288852 ATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGC 288911 |||||| | ||||| | | ||||||| ||||||| ||| |||| ||||| | || Sbjct 690 ATCAAATCGACCAGGTCTAAGTAATGCTTTATCTAATACATCAGCTCGATTTGTACCAGC 631 Query 288912 CAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTAAG 288971 || ||||| | | | | | |||||||||||| | ||| | ||||||||| Sbjct 630 TAAGACAACTACATGAGCTGAAGTATCAAATCCATCCATTTCTACTAATAATTGATTAAG 571 Query 288972 TGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttACC 289031 || ||| |||||||||||| |||| | | || || | | ||| |||||| Sbjct 570 CGTAGATTCTCTTTCATCATTT---CCTCCAAATCCTCCTGATTTACCTCTTGCTTTACC 514 Query 289032 AACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAA 289091 || ||||| || || || | || | | ||| || | ||| | | | || ||||||| Sbjct 513 AATCGCATCTATCTCATCTACAAATACAATACAAGGTGCATTCTTTTTGGCTGTTGCAAA 454 Query 289092 TAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGA 289151 || |||| ||| | || | ||| | || ||| ||||||||||||||||||| | || Sbjct 453 CAAATCTCGTACTCTTGAAGGTCCTACTCCTACAAACATTTCTACAAATTCAGATCCTGA 394 Query 289152 TACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACC 289211 ||| | ||||| || |||||| |||||| ||| | || | | || ||||| Sbjct 393 AACTGATAAGAATGGCACTCCTGCTTCTCCTGCTGTTGCTTTGGCTAATAAGGTTTTACC 334 Query 289212 TGTTCCAGGTGGTCC 289226 ||| || ||||| || Sbjct 333 TGTACCTGGTGGACC 319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471266484798825