Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05-
22] 29,225 sequences; 62,222,430 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq10901 120 9e-22
>seq10901
Length=2100
Score = 120 bits (132), Expect = 9e-22
Identities = 252/375 (67%), Gaps = 3/375 (1%)
Strand=Plus/Minus
Query 288852 ATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGC 288911
|||||| | ||||| | | ||||||| ||||||| ||| |||| ||||| | ||
Sbjct 690 ATCAAATCGACCAGGTCTAAGTAATGCTTTATCTAATACATCAGCTCGATTTGTACCAGC 631
Query 288912 CAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTAAG 288971
|| ||||| | | | | | |||||||||||| | ||| | |||||||||
Sbjct 630 TAAGACAACTACATGAGCTGAAGTATCAAATCCATCCATTTCTACTAATAATTGATTAAG 571
Query 288972 TGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttttACC 289031
|| ||| |||||||||||| |||| | | || || | | ||| ||||||
Sbjct 570 CGTAGATTCTCTTTCATCATTT---CCTCCAAATCCTCCTGATTTACCTCTTGCTTTACC 514
Query 289032 AACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAA 289091
|| ||||| || || || | || | | ||| || | ||| | | | || |||||||
Sbjct 513 AATCGCATCTATCTCATCTACAAATACAATACAAGGTGCATTCTTTTTGGCTGTTGCAAA 454
Query 289092 TAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGA 289151
|| |||| ||| | || | ||| | || ||| ||||||||||||||||||| | ||
Sbjct 453 CAAATCTCGTACTCTTGAAGGTCCTACTCCTACAAACATTTCTACAAATTCAGATCCTGA 394
Query 289152 TACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACC 289211
||| | ||||| || |||||| |||||| ||| | || | | || |||||
Sbjct 393 AACTGATAAGAATGGCACTCCTGCTTCTCCTGCTGTTGCTTTGGCTAATAAGGTTTTACC 334
Query 289212 TGTTCCAGGTGGTCC 289226
||| || ||||| ||
Sbjct 333 TGTACCTGGTGGACC 319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471266484798825
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |