Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05-
22] 29,225 sequences; 62,222,430 total letters
Query= NC_023613.1
Length=204815
Score E
Sequences producing significant alignments: (Bits) Value
seq25081 87.8 2e-12
seq25080 87.8 2e-12
>seq25081
Length=5636
Score = 87.8 bits (96), Expect = 2e-12
Identities = 78/97 (80%), Gaps = 2/97 (2%)
Strand=Plus/Plus
Query 122073 AAACTaaaaaaaaTGCTGTTATTATGGGTCGAAAAACTTGGGATAGTATTCCTGATAAAT 122132
||| |||| || || || |||||||| ||||||| ||||| |||||||| | ||||
Sbjct 1229 AAATTAAAGAATGTGATG--ATTATGGGAAGAAAAACATGGGAAAGTATTCCAAAGAAAT 1286
Query 122133 TTAAACCATTAAAAAATCGAGTAAATATAATAGTTTC 122169
||||||| ||| |||||||| | |||||||| |||||
Sbjct 1287 TTAAACCTTTAGAAAATCGAATTAATATAATTGTTTC 1323
>seq25080
Length=3840
Score = 87.8 bits (96), Expect = 2e-12
Identities = 78/97 (80%), Gaps = 2/97 (2%)
Strand=Plus/Plus
Query 122073 AAACTaaaaaaaaTGCTGTTATTATGGGTCGAAAAACTTGGGATAGTATTCCTGATAAAT 122132
||| |||| || || || |||||||| ||||||| ||||| |||||||| | ||||
Sbjct 1229 AAATTAAAGAATGTGATG--ATTATGGGAAGAAAAACATGGGAAAGTATTCCAAAGAAAT 1286
Query 122133 TTAAACCATTAAAAAATCGAGTAAATATAATAGTTTC 122169
||||||| ||| |||||||| | |||||||| |||||
Sbjct 1287 TTAAACCTTTAGAAAATCGAATTAATATAATTGTTTC 1323
Score = 87.8 bits (96), Expect = 2e-12
Identities = 78/97 (80%), Gaps = 2/97 (2%)
Strand=Plus/Plus
Query 122073 AAACTaaaaaaaaTGCTGTTATTATGGGTCGAAAAACTTGGGATAGTATTCCTGATAAAT 122132
||| |||| || || || |||||||| ||||||| ||||| |||||||| | ||||
Sbjct 3738 AAATTAAAGAATGTGATG--ATTATGGGAAGAAAAACATGGGAAAGTATTCCAAAGAAAT 3795
Query 122133 TTAAACCATTAAAAAATCGAGTAAATATAATAGTTTC 122169
||||||| ||| |||||||| | |||||||| |||||
Sbjct 3796 TTAAACCTTTAGAAAATCGAATTAATATAATTGTTTC 3832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655040618025000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |