Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_023613.1 Length=204815 Score E Sequences producing significant alignments: (Bits) Value seq25081 87.8 2e-12 seq25080 87.8 2e-12 >seq25081 Length=5636 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/97 (80%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 122073 AAACTaaaaaaaaTGCTGTTATTATGGGTCGAAAAACTTGGGATAGTATTCCTGATAAAT 122132 ||| |||| || || || |||||||| ||||||| ||||| |||||||| | |||| Sbjct 1229 AAATTAAAGAATGTGATG--ATTATGGGAAGAAAAACATGGGAAAGTATTCCAAAGAAAT 1286 Query 122133 TTAAACCATTAAAAAATCGAGTAAATATAATAGTTTC 122169 ||||||| ||| |||||||| | |||||||| ||||| Sbjct 1287 TTAAACCTTTAGAAAATCGAATTAATATAATTGTTTC 1323 >seq25080 Length=3840 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/97 (80%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 122073 AAACTaaaaaaaaTGCTGTTATTATGGGTCGAAAAACTTGGGATAGTATTCCTGATAAAT 122132 ||| |||| || || || |||||||| ||||||| ||||| |||||||| | |||| Sbjct 1229 AAATTAAAGAATGTGATG--ATTATGGGAAGAAAAACATGGGAAAGTATTCCAAAGAAAT 1286 Query 122133 TTAAACCATTAAAAAATCGAGTAAATATAATAGTTTC 122169 ||||||| ||| |||||||| | |||||||| ||||| Sbjct 1287 TTAAACCTTTAGAAAATCGAATTAATATAATTGTTTC 1323 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/97 (80%), Gaps = 2/97 (2%) Strand=Plus/Plus Query 122073 AAACTaaaaaaaaTGCTGTTATTATGGGTCGAAAAACTTGGGATAGTATTCCTGATAAAT 122132 ||| |||| || || || |||||||| ||||||| ||||| |||||||| | |||| Sbjct 3738 AAATTAAAGAATGTGATG--ATTATGGGAAGAAAAACATGGGAAAGTATTCCAAAGAAAT 3795 Query 122133 TTAAACCATTAAAAAATCGAGTAAATATAATAGTTTC 122169 ||||||| ||| |||||||| | |||||||| ||||| Sbjct 3796 TTAAACCTTTAGAAAATCGAATTAATATAATTGTTTC 3832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 655040618025000