Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq27080 87.8 4e-12 >seq27080 Length=11697 Score = 87.8 bits (96), Expect = 4e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 ||||| ||||| |||||||| || |||| || |||||||||||||| | |||||||| Sbjct 4696 ACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCAGCCAAAGTGCGGCCATCTTCG 4755 Query 204824 AGCTGCTTTCCGGCGA 204839 |||||||||||||||| Sbjct 4756 AGCTGCTTTCCGGCGA 4771 Score = 84.2 bits (92), Expect = 5e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362 |||||||||||||| | |||||||| | |||||||| || |||||| |||| || |||| Sbjct 4771 TCGCCGGAAAGCAGCTCGAAGATGGCCGCACTTTGGCTGACTACAACATCCAAAAGGAGT 4712 Query 206363 CTACTCTTCACCTTGT 206378 |||| ||||| ||||| Sbjct 4711 CTACCCTTCATCTTGT 4696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181378272741225