Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq28837 105 9e-18 >seq28837 Length=2583 Score = 105 bits (116), Expect = 9e-18 Identities = 151/212 (71%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 39938 ATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCC 39997 |||||||| || || || |||| ||||| | ||| |||||| || |||||||| Sbjct 383 ATCTGAAAGCCATAGAAGCATCGGGCTTCTGCCGCTTGAACCTCTCCACTGAATCTTTCA 442 Query 39998 GCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGCCAATACATGTTTAATA 40057 ||| || || || || |||||||| ||| || || || || || || ||||| ||| Sbjct 443 ATCAAGTTCTCGTTGACGATTCCATCTGAAGCAGCGAAGAAAGCTAAGACGTGTTTGATA 502 Query 40058 AAATATTTTTCATCGGGTGTCAATTTATTC---CAGTCATTGATATCTTTTGATATATCT 40114 || | ||| || || |||| | ||| || || | ||||||||||| | ||| Sbjct 503 AAGTGTTTCTCGTCATCGTTCAACCTGTTCTCCCAATCGTGCATATCTTTTGAAAGATCA 562 Query 40115 ACTTCTTCAGCTGTCCAAAACGACGCCTCTGC 40146 | |||||||||||||||||||| ||||| || Sbjct 563 ATCTCTTCAGCTGTCCAAAACGAAGCCTCGGC 594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686657863629000