Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05-
22] 29,225 sequences; 62,222,430 total letters
Query= NC_028104.1
Length=73689
Score E
Sequences producing significant alignments: (Bits) Value
seq25269 89.7 2e-13
>seq25269
Length=7113
Score = 89.7 bits (98), Expect = 2e-13
Identities = 287/435 (66%), Gaps = 13/435 (3%)
Strand=Plus/Plus
Query 64839 TCAAGTAATCAATGATTTCTAACGGATTATAACACATAATGTCAGTACTAAATCCTGTGC 64898
|||||| || | || || | |||||||||| | || || | ||| ||||||| |
Sbjct 592 TCAAGTTTTCGACAATATCCATCGGATTATAATTCGGTATATCTGAACTCCATCCTGTCC 651
Query 64899 CAATACCCTTTGAGCCATTTATTAAAATCATCGGAATAATTGGTGCATAAAAGATAGGCT 64958
|||| || |||| ||||||| ||| | |||||| | | ||| |||| | ||| |
Sbjct 652 CAATTCCACTTGATCCATTTACTAAGACCATCGGTAAGACAGGTACATACCATTCAGGTT 711
Query 64959 CAACAATGAGA-CCATCATCATCCAAATACTTCAAAATGGCATCATCCTCTTTTGGAAAT 65017
| | |||| || |||||| ||||| ||||||| | ||||| | || ||
Sbjct 712 CGATT-TGAGCTCCGTCATCAGTTAAATAATTCAAAACGTGGTCATCTTGAGGCGGGAAG 770
Query 65018 ATAGAACGAGTTATTTTATTCAAT-TGAGTATAAATATATCTTTCGGATGCGTGGTCTTG 65076
|| | | ||| || || |||||| | ||| | ||||| ||| | || || ||||
Sbjct 771 ATCGCCCTAGTAATCTT-TTCAATATTGGTAAAGATATACCTTGCAGAGGCTGCATCTTT 829
Query 65077 TCC---AGTTCGTCGTGTTCCAAACTGACCATTTGGCATTAATAAA--TTAATATTGTTT 65131
|| | || || ||| ||||| || ||||| || | || || ||||| || ||
Sbjct 830 ACCGCCATTTGCTCTTGTACCAAATTGTCCATTGGG--TGAAAGAACGTTAATGTTATTG 887
Query 65132 GAACCAATAAAATTCTGAGCCATTCCGATAATTGCTGCATTTAAACTCGCTTCACCGTGA 65191
|| | ||| || || || | | ||| ||| | | | | ||| ||| ||||||
Sbjct 888 CTTCCGACAAAGTTTTGTGCGAGTGCGACAATCGTTTGTGTAAGACTTTGTTCTCCGTGA 947
Query 65192 TGATATCCTGAATGTTCAGAGACA-TATCCACTAAATTGAGCAACTTTTATTTCCGTTGT 65250
||||| |||||||||| | ||| || || | | |||||| ||||| || |||| | |
Sbjct 948 TGATAGGCTGAATGTTC-GGCACAGTAACCTCCCAGTTGAGCTACTTTGATCTCCGCTTT 1006
Query 65251 TAAATTCTTTTTAAA 65265
|| ||| |||| ||
Sbjct 1007 CAATTTCCTTTTGAA 1021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 235596055571250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |