Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05-
22] 29,225 sequences; 62,222,430 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq24802 82.4 8e-11
>seq24802
Length=2283
Score = 82.4 bits (90), Expect = 8e-11
Identities = 195/290 (67%), Gaps = 6/290 (2%)
Strand=Plus/Plus
Query 78868 AAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTT 78927
||| |||| || | || | || ||||| |||| || || || | ||||||| ||||
Sbjct 1883 AAGGCATCTGCTAATCCGTTTACTCCGATTCCGATGGGACGATGTCTCATGTTGGACTTT 1942
Query 78928 CGGGCCGCCTCGGTCGGG-TAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGAC 78986
|| | | || |||| || | ||| ||| || | || |||| ||| | ||||||
Sbjct 1943 TTAGCTTC-TGGGACGGGGTAGTAATTCACATCTATTATACGATTCAAGTTCCACGTGAC 2001
Query 78987 GACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATGATTTCCTT--TGATGAAAGTC 79044
|| |||||||||| | || ||||||| | || | | | |||| | |||
Sbjct 2002 TTCCTTCGTCACCTCGTGTAGCTTTTGGAAATCATA--GACTCCGTCGGTGATATACGTC 2059
Query 79045 GGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATG 79104
|| || | ||| |||||||| || || ||| ||| || ||| ||| |||||||
Sbjct 2060 GGCAGCGCGATCGAGGCCAGGTTACAAACCGCCACCTCATCTGGGGCTGAATACTCGATG 2119
Query 79105 ATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTT 79154
|| || || || | || || |||||||||||||| | |||||| || ||
Sbjct 2120 ATCTCAGTACAAAGGTTCGATGACTTGATGGTGCCAAGGTTCTTTTGATT 2169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548324417034000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |