Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05-
22] 29,225 sequences; 62,222,430 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq16220 100 7e-16
seq25279 96.9 8e-15
>seq16220
Length=1922
Score = 100 bits (110), Expect = 7e-16
Identities = 85/105 (81%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 210990 CGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATG 211049
||||||||||| || || | || ||||||||||| ||||| ||| ||||| ||||||
Sbjct 406 CGTTGTTGGTCTGGTGGGATGCCCTCCTTGTCCTGAATCTTGGCTTTGACGTTGTCGATG 465
Query 211050 GTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGA 211094
|||||||| |||||||||||| ||||| || || || ||||||
Sbjct 466 GTGTCAGAAGATTCAACCTCGAGGGTGATGGTTTTGCCGGTGAGA 510
>seq25279
Length=2861
Score = 96.9 bits (106), Expect = 8e-15
Identities = 98/125 (78%), Gaps = 2/125 (2%)
Strand=Plus/Minus
Query 210982 AGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGT 211041
|||| || ||||||||||| || |||| |||||||| || || ||||| ||||| |
Sbjct 2147 AGATGAGTCGTTGTTGGTCCGGGGGAATGCCTTCCTTTTCTTGAATCTTGGTCTTCACAT 2088
Query 211042 TTTCGATGGTGTCAG-AGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTT 211100
| || || ||||| | ||||| | |||||||||||||| ||||| |||||||| | | |
Sbjct 2087 TGTCAATTGTGTCGGCAGCTT-CGACCTCGAGAGTGATAGTCTTACCCGTGAGGCTGTGT 2029
Query 211101 ACAAA 211105
|||||
Sbjct 2028 ACAAA 2024
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1158717960967125
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |