Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05-
22] 29,225 sequences; 62,222,430 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq16220 91.5 4e-13
seq25279 84.2 5e-11
>seq16220
Length=1922
Score = 91.5 bits (100), Expect = 4e-13
Identities = 113/155 (73%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 225535 TTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGT 225594
|||||||| || | || | || ||||| || || || || |||||||| | ||||||
Sbjct 3 TTGTAATCAGCAAGGGTACGTCCGTCTTCAAGTTGTTTTCCGGCGAAGATCAAACGTTGT 62
Query 225595 TGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCT 225654
|| || || ||||||||||| || ||||||||||| ||| || || ||||| ||
Sbjct 63 TGATCCGGTGGAATACCTTCTTTATCTTGGATCTTGGCCTTGACGTTGTCAATGGTATCG 122
Query 225655 GAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|| | ||| || || | ||||| ||||| || ||
Sbjct 123 GAAGATTCGACCTCGAGGGTGATAGTCTTCCCGGT 157
>seq25279
Length=2861
Score = 84.2 bits (92), Expect = 5e-11
Identities = 84/109 (77%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 225581 AGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAG 225640
|||| |||||||||||||| || ||||| |||||||| ||||| ||||| |||||||
Sbjct 2147 AGATGAGTCGTTGTTGGTCCGGGGGAATGCCTTCCTTTTCTTGAATCTTGGTCTTCACAT 2088
Query 225641 CTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689
|| || ||||| | | ||| || || | ||||| ||||| |||||
Sbjct 2087 TGTCAATTGTGTCGGCAGCTTCGACCTCGAGAGTGATAGTCTTACCCGT 2039
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192084662282150
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |