Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq28837 82.4 7e-11 >seq28837 Length=2583 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/214 (69%), Gaps = 3/214 (1%) Strand=Plus/Plus Query 4871 AATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTC 4930 ||||||||| || || ||||||| ||||||| ||||||| || || |||||||| Sbjct 382 AATCTGAAAGCCATAGAAGCATCGGGCTTCTGCCGCTTGAACCTCTCCACTGAATCTTTC 441 Query 4931 TACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATAT 4990 | ||||| ||||| || || || || || || || || || || || || || Sbjct 442 AATCAAGTTCTCGTTGACGATTCCATCTGAAGCAGCGAAGAAAGCTAAGACGTGTTTGAT 501 Query 4991 AAAGTACTGTTCGTCAGGCTTAAGTTTTTTC---CAGTGGGGCAAATCTTTAGTTAAATC 5047 ||||| | |||||| || | | ||| || | | ||| |||||| | | ||| Sbjct 502 AAAGTGTTTCTCGTCATCGTTCAACCTGTTCTCCCAATCGTGCATATCTTTTGAAAGATC 561 Query 5048 AACTTCTTCAACAGTCCAAAACGACGCTTCCGCT 5081 || |||||| | ||||||||||| || || ||| Sbjct 562 AATCTCTTCAGCTGTCCAAAACGAAGCCTCGGCT 595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426897493606925