Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05-
22] 29,225 sequences; 62,222,430 total letters
Query= NC_031038.1
Length=222832
Score E
Sequences producing significant alignments: (Bits) Value
seq28837 104 3e-17
>seq28837
Length=2583
Score = 104 bits (114), Expect = 3e-17
Identities = 156/221 (71%), Gaps = 3/221 (1%)
Strand=Plus/Plus
Query 46951 ATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCA 47010
|||||||| || || || |||| ||||| | || |||||| || |||| ||||
Sbjct 383 ATCTGAAAGCCATAGAAGCATCGGGCTTCTGCCGCTTGAACCTCTCCACTGAATCTTTCA 442
Query 47011 GACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATA 47070
||| ||||| || || |||||||| |||||| || || || || || ||||| |||
Sbjct 443 ATCAAGTTCTCGTTGACGATTCCATCTGAAGCAGCGAAGAAAGCTAAGACGTGTTTGATA 502
Query 47071 AAATATTTTTC---ATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCT 47127
|| | ||| || |||| | | || | ||| || | ||||||||||| | |||
Sbjct 503 AAGTGTTTCTCGTCATCGTTCAACCTGTTCTCCCAATCGTGCATATCTTTTGAAAGATCA 562
Query 47128 ACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATA 47168
| |||||||||||||| || || ||||| ||| |||||
Sbjct 563 ATCTCTTCAGCTGTCCAAAACGAAGCCTCGGCTCGCTTATA 603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 712673956152000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |