Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq28837 104 3e-17 >seq28837 Length=2583 Score = 104 bits (114), Expect = 3e-17 Identities = 156/221 (71%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 46951 ATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATCGTTCA 47010 |||||||| || || || |||| ||||| | || |||||| || |||| |||| Sbjct 383 ATCTGAAAGCCATAGAAGCATCGGGCTTCTGCCGCTTGAACCTCTCCACTGAATCTTTCA 442 Query 47011 GACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATA 47070 ||| ||||| || || |||||||| |||||| || || || || || ||||| ||| Sbjct 443 ATCAAGTTCTCGTTGACGATTCCATCTGAAGCAGCGAAGAAAGCTAAGACGTGTTTGATA 502 Query 47071 AAATATTTTTC---ATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCT 47127 || | ||| || |||| | | || | ||| || | ||||||||||| | ||| Sbjct 503 AAGTGTTTCTCGTCATCGTTCAACCTGTTCTCCCAATCGTGCATATCTTTTGAAAGATCA 562 Query 47128 ACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATA 47168 | |||||||||||||| || || ||||| ||| ||||| Sbjct 563 ATCTCTTCAGCTGTCCAAAACGAAGCCTCGGCTCGCTTATA 603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712673956152000