Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05-
22] 29,225 sequences; 62,222,430 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq28837 105 7e-18
>seq28837
Length=2583
Score = 105 bits (116), Expect = 7e-18
Identities = 158/222 (71%), Gaps = 3/222 (1%)
Strand=Plus/Plus
Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTT 23891
||||||||| ||||| || |||| ||||| | | |||||| || | |||||||
Sbjct 382 AATCTGAAAGCCATAGAAGCATCGGGCTTCTGCCGCTTGAACCTCTCCACTGAATCTTTC 441
Query 23892 AGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT 23951
| || || ||||| || || ||||| |||||| |||||||| | || | ||| ||
Sbjct 442 AATCAAGTTCTCGTTGACGATTCCATCTGAAGCAGCGAAGAAAGCTAAGACGTGTTTGAT 501
Query 23952 AAAATGTCTTTCATCA--GTTGATAATTTTTTCC-AATCATTAATATCTTTTGATAAATC 24008
||| ||| | || ||| ||| | | || ||| |||| | ||||||||||| | |||
Sbjct 502 AAAGTGTTTCTCGTCATCGTTCAACCTGTTCTCCCAATCGTGCATATCTTTTGAAAGATC 561
Query 24009 AACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATA 24050
|| || ||| |||||||||| ||| ||| ||||||||
Sbjct 562 AATCTCTTCAGCTGTCCAAAACGAAGCCTCGGCTCGCTTATA 603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521297493915000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |