Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq28837 105 7e-18 >seq28837 Length=2583 Score = 105 bits (116), Expect = 7e-18 Identities = 158/222 (71%), Gaps = 3/222 (1%) Strand=Plus/Plus Query 23832 AATCTGAAACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTT 23891 ||||||||| ||||| || |||| ||||| | | |||||| || | ||||||| Sbjct 382 AATCTGAAAGCCATAGAAGCATCGGGCTTCTGCCGCTTGAACCTCTCCACTGAATCTTTC 441 Query 23892 AGCTAAATTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTAT 23951 | || || ||||| || || ||||| |||||| |||||||| | || | ||| || Sbjct 442 AATCAAGTTCTCGTTGACGATTCCATCTGAAGCAGCGAAGAAAGCTAAGACGTGTTTGAT 501 Query 23952 AAAATGTCTTTCATCA--GTTGATAATTTTTTCC-AATCATTAATATCTTTTGATAAATC 24008 ||| ||| | || ||| ||| | | || ||| |||| | ||||||||||| | ||| Sbjct 502 AAAGTGTTTCTCGTCATCGTTCAACCTGTTCTCCCAATCGTGCATATCTTTTGAAAGATC 561 Query 24009 AACTTCATCAACTGTCCAAAAACTTGCCAAGGCACGCTTATA 24050 || || ||| |||||||||| ||| ||| |||||||| Sbjct 562 AATCTCTTCAGCTGTCCAAAACGAAGCCTCGGCTCGCTTATA 603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521297493915000