Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq7295 100 6e-16 >seq7295 Length=5679 Score = 100 bits (110), Expect = 6e-16 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 61081 GAATTTGTCAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAG 61140 || ||| |||||| || || || ||||| ||||| ||||| |||| ||||||||| | Sbjct 4495 GATTTTATCAAGCTTCTACTTCAGAACTTTATGGTAAAGTGGTCGAAACTCCTCAAACTG 4436 Query 61141 AAAGGACTCCGTTTTATCCTCGTAGCCCGTATGGTGTTGCAAAACTATACGCTTACTGGA 61200 ||| ||||| || |||||||| || || ||||||||||||||||| || | ||| | | Sbjct 4435 AAAAAACTCCTTTCTATCCTCGAAGTCCCTATGGTGTTGCAAAACTTTATGGGTACGGCA 4376 Query 61201 TTT 61203 ||| Sbjct 4375 TTT 4373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057492281269250