Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq13424 98.7 9e-16 >seq13424 Length=872 Score = 98.7 bits (108), Expect = 9e-16 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||| |||||| | ||| || ||||| |||| |||||||| || ||||||||||| Sbjct 413 GATAAGGAAGGTATTCCCCCTGACCAACAGCGACTAATCTTTGCCGGTAAACAACTGGAG 354 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| ||| | || |||||||| || || ||||| ||||||||||| |||| || Sbjct 353 GATGGACGAACACTTGCTGATTACAACATCCAAAAGGAGTCTACTCTTCATTTGGTATTG 294 Query 29175 CGATTACGAGGAGG 29188 ||||| || ||||| Sbjct 293 CGATTGCGCGGAGG 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428208232056125